Groupleader
Main research areas
- Nanopore sequencing data processing
- New bacterial strains genotyping
- Hybrid assembly and annotation of bacterial genomes
- CNV (Copy Number Variation) and MGE (Mobile Genetic Element) detection in bacterial genomes
Main practical research results
Main research publications
- Word entropy-based approach to detect highly variable genetic markers for bacterial genotyping
- A degeneration-reducing criterion for optimal digital mapping of genetic codes
- Application of mini-MLST and whole genome sequencing in low diversity hospital extended-spectrum beta-lactamase producing Klebsiella pneumoniae population
- Advanced DNA fingerprint genotyping based on a model developed from real chip electrophoresis data
- Rapid bacterial species delineation based on parameters derived from genome numerical representations
